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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906865.1_cds_XP_016457045.1_50814
CDS Infomation

[gene=LOC107780935] [db_xref=GeneID:107780935] [protein=probable inactive leucine-rich repeat receptor-like protein kinase At1g66830] [protein_id=XP_016457045.1] [location=complement(join(20900..21531,24946..26284))] [gbkey=CDS]
Sequence

ATGCATCTTTCAAACCTTTTAGCAATTGTTATTCTTTGTTTCTTCACATTTGCTATCTTT
CCTACTTTTGCACTGAATTCAGATGGACTTTCATTATTAGCTTTAAAATCAGCTATTTCT
TCTGACCCAACTGAATTTCTTGCATCTTGGTCTGAATCAGACTCATCACCATGTCATTGG
AATGGAATCAAATGTGATGATCAAAATCAAAAAGTCATTTCCATTTCACTCTCAGCCAAG
AATCTCACTGGCTATATCCCTTCTGAAATTGGTGCACTTTCAAATCTCTCAATTCTCACT
CTTTCCTACAACAACTTCTCTAAACCAATCCCAATTCATCTCTTTAATGCTACTTCACTT
CACTCACTTGACCTTTCACACAATGCATTCACTGGTTTTTTGCCTGAGCAAATTACTTCA
CTTATTAACCTTAATCACCTTGATCTTTCTGCTAATTTTCTTAATGGTTCACTTCCTGAG
GAGCTAACTGAGCTTACTCAGCTTACTGGGACTTTGAATCTTTCGTATAACAGATTTTCC
TTCGAAGTTCCGGTGAGTTATGGTAAGTTTCCGATGACGTTGAGTTTGGACTTGAGGCAT
AATAATTTGACTGGTAAAATACCTTCAGTTGGGTCATTGTTAAATCAAGGGCCTACTGCA
TTTTCGGGGAACCCTTTACTTTGTGGGTTTCCATTGGAGACTCCATGTGCAGAACCAGAA
GCTCAAAAACCTAGCGTTTTGCCAAATCTTGAAACCCCTAAAGATTTAGGGTTTGTAGAA
AAGGGCAAATCTGGAAATGGGTCGGTGGCAGTTTCTTTAATCTCTGGCGTATCGGTGGTG
ATAGGAGTAGTGTTTGTTTCAGTGTGGGTATTGAGGAAAAAATGGAAGTTGGATGAGGGT
AAAATGGGAAAAGAAAAGTTTGATAAGGAGAAGTCACAGTCACAGGAGGTGGTTGGGTTT
GGTTGTGGGGGGAGTGAGGGGGAGGGGCAAAAGGGTAAATATGTAGTGTTTGATGAAGGG
TTTGGGTTGGAGTTGGAGGATTTGTTAAGGGCATCAGCTTATGTGGTGGGGAAGAGTAGG
AGTGGGATAGTTTATAAAGTGGTGGCAGGTGGCGGCAGGGGATCGGCGGTAGGTGGTGGC
GCTGCGGTGGTCGCTGTTCGGAGATTGAGCGAGGGGGATGCCACGTGGCGGTTCAAGGAG
TTTGAGACGGAGGTGGAAGCCATTGGGAAAGTACAACATCCAAATGTGGCGAGGCTTAGA
GCTTATTACTATGCAAGTGATGAGAAATTGCTGGTTACTGATTTCATCCGCAATGGCAGC
TTGCACGATGCCTTACATGGAGTACCTGGTAATTCCCTGCCACCATTGTCGTGGGCAGCT
AGACTGAAGATCGCTCAAGGCATAGCTCGGGGTCTAATGCACATTCACGAATGTAGTCCT
AGGAAATATGTTCATGGGAACATAAAATCGTCGAAAATCCTTCTTGACGATGATTTGCAA
GCTTACATATCCGGTTTTGGGTTGACTCGTCTTATTTCAGGCTCCTCGAAGCTCGTTAAT
AGTAGTACCAAGAAGCTGAATACAAGTCAAATCATAGTAAGCCCTAAAAACTCAACTTCA
TCATCCATTATGTACGTAGCACCTGAGTCTCGAGTTCCTGGCTCCAAGTTCACACAAAAA
TGCGACATCTATTCGTTTGGGATTGTGCTTTTGGAGATGTTGACTGGTCGGTTGCCAGAT
GGAGGATCGGAAGATGATGGAAAGGGGCTCGAGAGTCATGTTAGGAAGGTTTTTAGGCAA
GAACGACCCTTGTCCGAGATCATAGATCCTGCTCTCTTGAATGAGGTTCATGCCAAAAAG
CAAGTCGTTGCAGCATTTCATATTGCTCTCAACTGCACAGAACTGGATCCCGAGCTTCGG
CCAAGGATGAGAACAGTTTCTGATAACCTTGATCGTATCAAACTGCAGTGA

Peptide Sequence

PEP ID

XP_016457045.1
PEP Infomation

PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Nicotiana tabacum]
Sequence

MHLSNLLAIVILCFFTFAIFPTFALNSDGLSLLALKSAISSDPTEFLASWSESDSSPCHW
NGIKCDDQNQKVISISLSAKNLTGYIPSEIGALSNLSILTLSYNNFSKPIPIHLFNATSL
HSLDLSHNAFTGFLPEQITSLINLNHLDLSANFLNGSLPEELTELTQLTGTLNLSYNRFS
FEVPVSYGKFPMTLSLDLRHNNLTGKIPSVGSLLNQGPTAFSGNPLLCGFPLETPCAEPE
AQKPSVLPNLETPKDLGFVEKGKSGNGSVAVSLISGVSVVIGVVFVSVWVLRKKWKLDEG
KMGKEKFDKEKSQSQEVVGFGCGGSEGEGQKGKYVVFDEGFGLELEDLLRASAYVVGKSR
SGIVYKVVAGGGRGSAVGGGAAVVAVRRLSEGDATWRFKEFETEVEAIGKVQHPNVARLR
AYYYASDEKLLVTDFIRNGSLHDALHGVPGNSLPPLSWAARLKIAQGIARGLMHIHECSP
RKYVHGNIKSSKILLDDDLQAYISGFGLTRLISGSSKLVNSSTKKLNTSQIIVSPKNSTS
SSIMYVAPESRVPGSKFTQKCDIYSFGIVLLEMLTGRLPDGGSEDDGKGLESHVRKVFRQ
ERPLSEIIDPALLNEVHAKKQVVAAFHIALNCTELDPELRPRMRTVSDNLDRIKLQ

Transcript Sequence

Gene sequence data has not been registered.